C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pregnancy specific beta-1-glycoprotein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000231924 PSG1 9606 - 19:42866464-42879822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244296 PSG1-002 42867206-42879719 protein_coding
  ENST00000312439 PSG1-004 42867193-42879667 protein_coding
  ENST00000403380 PSG1-003 42866483-42879671 protein_coding
  ENST00000436291 PSG1-001 42866464-42879698 protein_coding
  ENST00000595124 PSG1-006 42866466-42879710 protein_coding
  ENST00000595356 PSG1-007 42866471-42879647 protein_coding
  ENST00000595930 PSG1-011 42871801-42878424 protein_coding
  ENST00000597058 PSG1-012 42868101-42878103 protein_coding
  ENST00000601073 PSG1-010 42876739-42879822 processed_transcript
  ENST00000601456 PSG1-009 42874102-42879680 processed_transcript
  ENST00000602039 PSG1-008 42866466-42870645 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLungOvaryPlacentaTestisENST00000244296ENST00000403380ENST00000436291ENST00000595930ENST00000601456ENST00000602039
Transcript ID Adipose Brain Breast Heart Lung Ovary Placenta Testis
ENST00000244296 N/A N/A 0.119±0.00 N/A N/A 0.076±0.04 91.195±0.00 0.044±0.00
ENST00000403380 N/A N/A N/A N/A 0.141±0.00 0.164±0.00 93.050±100.53 N/A
ENST00000436291 N/A N/A N/A N/A N/A 0.074±0.00 232.789±256.07 N/A
ENST00000595930 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00
ENST00000601456 0.189±0.00 N/A N/A 0.050±0.00 N/A N/A N/A N/A
ENST00000602039 0.026±0.00 0.043±0.02 0.036±0.00 0.057±0.00 N/A 0.092±0.00 N/A 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_000I CGP 19:42721638-43205603
CIL_0003UJ CIL_0003UJ_000G CGP 19:42728080-43205603
CIL_0003UJ CIL_0003UJ_000E CGP 19:42752686-42879822
CIL_0003UJ CIL_0003UJ_000K CGP 19:42866464-43082671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007565 TAS female pregnancy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 si:dkey-11o1.2 protein_coding Danio_rerio

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