C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: high mobility group AT-hook 1 pseudogene 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000233313 HMGA1P5 9606 - 10:75276376-75276646 processed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000412453 HMGA1P5-001 75276376-75276646 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartLungTestisENST00000412453
Transcript ID Adipose Breast Colon Heart Lung Testis
ENST00000412453 0.114±0.00 0.142±0.00 0.128±0.00 0.249±0.00 0.276±0.00 0.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0008K8 CIL_0008K8_0001 VISTA 10:75104806-75705881
CIL_0007IE CIL_0007IE_0001 CGP 10:75233969-75401906
CIL_0008KK CIL_0008KK_0001 VISTA 10:75241252-75843906

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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