C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 1278
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000235437 LINC01278 9606 - X:63343227-63561071 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000433061 LINC01278-001 63509942-63561049 sense_overlapping
  ENST00000608623 LINC01278-004 63426560-63431612 retained_intron
  ENST00000608788 LINC01278-007 63399404-63561023 sense_overlapping
  ENST00000609143 LINC01278-002 63426560-63561049 sense_overlapping
  ENST00000609401 LINC01278-003 63426559-63560993 sense_overlapping
  ENST00000610088 LINC01278-005 63343227-63561071 sense_overlapping
  ENST00000610234 LINC01278-006 63345489-63561052 sense_overlapping

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000433061ENST00000608623ENST00000608788ENST00000609143ENST00000609401ENST00000610234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000433061 N/A N/A N/A 2.164±0.00 2.478±0.00 N/A 1.448±0.00 N/A N/A N/A N/A 0.226±0.00 N/A 0.965±0.00
ENST00000608623 0.557±0.00 1.145±0.00 N/A 0.615±0.00 0.518±0.02 0.632±0.37 0.695±0.00 0.555±0.47 0.524±0.00 1.504±0.00 0.609±0.00 0.942±0.55 N/A 0.527±0.01
ENST00000608788 N/A N/A N/A N/A N/A 1.923±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609143 4.810±0.00 6.494±0.00 7.160±0.00 2.931±0.37 4.653±0.00 5.605±4.35 4.959±0.00 2.664±1.97 2.742±0.13 3.881±2.64 3.988±1.60 4.034±3.31 7.022±2.68 3.025±2.13
ENST00000609401 N/A N/A 1.360±0.00 1.822±0.00 1.081±0.00 2.847±0.00 0.543±0.32 1.437±0.00 N/A 0.807±0.00 N/A 2.829±0.00 1.949±0.34 1.734±0.00
ENST00000610234 N/A N/A N/A 2.435±0.00 N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A N/A 1.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057E CIL_00057E_0001 CGP X:57906708-63351344

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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