C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class I, F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000237508 HLA-F 9606 + CHR_HSCHR6_MHC_MANN_CTG1:29719844-29735599 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000426675 HLA-F-006 29721108-29723595 protein_coding
  ENST00000435058 HLA-F-001 29719844-29723595 protein_coding
  ENST00000437020 HLA-F-004 29720348-29721300 protein_coding
  ENST00000440590 HLA-F-002 29720533-29723595 protein_coding
  ENST00000445657 HLA-F-003 29720477-29724367 protein_coding
  ENST00000452916 HLA-F-005 29722603-29724367 protein_coding
  ENST00000460067 HLA-F-007 29720461-29721484 processed_transcript
  ENST00000466921 HLA-F-010 29720573-29721421 processed_transcript
  ENST00000468678 HLA-F-014 29722123-29735599 processed_transcript
  ENST00000473159 HLA-F-009 29720503-29722156 processed_transcript
  ENST00000474636 HLA-F-008 29720496-29723595 processed_transcript
  ENST00000480742 HLA-F-012 29721226-29723595 processed_transcript
  ENST00000490259 HLA-F-013 29722523-29726422 processed_transcript
  ENST00000490304 HLA-F-011 29721009-29722368 processed_transcript
  ENST00000551780 HLA-F-209 29720409-29723594 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002480 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005886 TAS plasma membrane
GO:0006955 IEA immune response
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IDA membrane
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0030670 TAS phagocytic vesicle membrane
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0046978 IPI TAP1 binding
GO:0046979 IPI TAP2 binding
GO:0050776 TAS regulation of immune response
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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