C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 877
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000241163 LINC00877 9606 - 3:72035300-72242565 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000462492 LINC00877-006 72092429-72100869 lincRNA
  ENST00000464271 LINC00877-005 72060933-72100455 lincRNA
  ENST00000468646 LINC00877-001 72035300-72100427 lincRNA
  ENST00000469218 LINC00877-007 72060797-72234244 lincRNA
  ENST00000470712 LINC00877-003 72059822-72100112 lincRNA
  ENST00000481148 LINC00877-008 72060841-72242565 lincRNA
  ENST00000488545 LINC00877-004 72097728-72100957 lincRNA
  ENST00000498432 LINC00877-002 72060764-72100303 lincRNA
  ENST00000608654 LINC00877-009 72061061-72101074 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000462492ENST00000468646ENST00000470712ENST00000481148ENST00000488545ENST00000608654
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000462492 N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A
ENST00000468646 N/A 0.132±0.00 0.094±0.00 N/A 0.035±0.00 0.010±0.00 0.037±0.00 0.089±0.00 N/A 0.090±0.08 0.116±0.05 0.784±0.00
ENST00000470712 N/A N/A 0.099±0.00 N/A N/A N/A 0.398±0.00 0.096±0.00 N/A N/A N/A N/A
ENST00000481148 0.304±0.00 N/A N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488545 0.120±0.00 N/A 0.127±0.00 0.114±0.00 0.048±0.00 0.011±0.00 N/A N/A 0.111±0.00 N/A 0.115±0.01 0.220±0.00
ENST00000608654 N/A N/A N/A N/A 0.742±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088J CIL_00088J_0001 VISTA 3:71639690-72241632
CIL_0003N4 CIL_0003N4_0002 CGP 3:71771656-72446918
CIL_00098S CIL_00098S_0001 VISTA 3:72018994-72621079

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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