C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CMT1A duplicated region transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000241322 CDRT1 9606 - 17:15565483-15619704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261644 CDRT1-009 15605224-15615694 protein_coding
  ENST00000354433 CDRT1-001 15588388-15598797 protein_coding
  ENST00000395667 CDRT1-201 15565483-15619704 protein_coding
  ENST00000395906 CDRT1-007 15588663-15619512 protein_coding
  ENST00000472534 CDRT1-003 15565484-15593408 protein_coding
  ENST00000475944 CDRT1-004 15594553-15596632 retained_intron
  ENST00000571263 CDRT1-006 15588902-15598618 nonsense_mediated_decay
  ENST00000583965 CDRT1-005 15588902-15598618 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleTestisENST00000261644ENST00000354433ENST00000395667ENST00000395906ENST00000472534
Transcript ID Bladder Muscle Testis
ENST00000261644 N/A N/A 4.477±0.00
ENST00000354433 N/A 1.285±0.00 N/A
ENST00000395667 N/A N/A 1.145±0.34
ENST00000395906 N/A N/A 1.581±0.00
ENST00000472534 0.313±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086484 fbxw10 F-box and WD repeat domain containing 10 protein_coding Danio_rerio
ENSMUSG00000090173 Fbxw10 F-box and WD-40 domain protein 10 protein_coding Mus_musculus

Loading