C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pregnancy specific beta-1-glycoprotein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000242221 PSG2 9606 - 19:43064211-43083045 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329509 PSG2-007 43065489-43075407 protein_coding
  ENST00000406487 PSG2-001 43064211-43082668 protein_coding
  ENST00000491995 PSG2-005 43081787-43082668 processed_transcript
  ENST00000593482 PSG2-006 43071771-43083045 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329509ENST00000406487ENST00000491995
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329509 0.266±0.00 N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 214.720±202.69 N/A
ENST00000491995 0.207±0.00 0.166±0.00 0.257±0.00 0.568±0.00 0.764±0.00 0.082±0.00 1.020±0.00 0.056±0.00 0.397±0.00 0.058±0.00 0.031±0.00 N/A 0.293±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_000I CGP 19:42721638-43205603
CIL_0003UJ CIL_0003UJ_000G CGP 19:42728080-43205603
CIL_0003UJ CIL_0003UJ_000K CGP 19:42866464-43082671
CIL_0003UJ CIL_0003UJ_000J CGP 19:42906822-43082671
CIL_0003UJ CIL_0003UJ_000M CGP 19:43007656-43083045
CIL_0003UJ CIL_0003UJ_000L CGP 19:43064211-43186536

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0007565 NAS female pregnancy
GO:0016477 NAS cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 si:dkey-11o1.2 protein_coding Danio_rerio

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