C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class II, DM alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000242685 HLA-DMA 9606 - CHR_HSCHR6_MHC_QBL_CTG1:32877327-32899448 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000435503 HLA-DMA-004 32877327-32881778 protein_coding
  ENST00000450601 HLA-DMA-001 32877327-32881839 protein_coding
  ENST00000452434 HLA-DMA-002 32877327-32881825 protein_coding
  ENST00000454298 HLA-DMA-006 32877988-32881178 protein_coding
  ENST00000458066 HLA-DMA-009 32878374-32897826 protein_coding
  ENST00000466043 HLA-DMA-005 32878801-32881751 retained_intron
  ENST00000469049 HLA-DMA-007 32877327-32878388 retained_intron
  ENST00000472934 HLA-DMA-003 32877327-32881825 retained_intron
  ENST00000479292 HLA-DMA-010 32877488-32897176 processed_transcript
  ENST00000491978 HLA-DMA-008 32877455-32899448 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0002503 IDA peptide antigen assembly with MHC class II protein complex
GO:0002504 IEA antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
GO:0005515 IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0006955 IEA immune response
GO:0009986 IDA cell surface
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019882 IEA antigen processing and presentation
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0023026 IDA MHC class II protein complex binding
GO:0042612 IEA MHC class I protein complex
GO:0042613 IEA:IDA MHC class II protein complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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