C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 5, zeta 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000242802 AP5Z1 9606 + 7:4737388-4794395 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000348624 AP5Z1-001 4775622-4791768 protein_coding
  ENST00000401897 AP5Z1-201 4737388-4794395 protein_coding
  ENST00000469614 AP5Z1-004 4788226-4791750 retained_intron
  ENST00000477454 AP5Z1-007 4786375-4789039 retained_intron
  ENST00000477680 AP5Z1-002 4775633-4791755 retained_intron
  ENST00000490487 AP5Z1-008 4789837-4791727 processed_transcript
  ENST00000491375 AP5Z1-005 4783323-4785048 retained_intron
  ENST00000496303 AP5Z1-003 4775652-4794312 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverOvaryPlacentaTestisENST00000348624
Transcript ID Adipose Adrenal Breast Kidney Liver Ovary Placenta Testis
ENST00000348624 11.760±0.00 17.923±0.00 12.134±0.00 5.329±4.75 4.473±0.00 12.327±1.84 9.316±1.54 9.407±2.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MA CIL_0002MA_0001 CGP 7:3301448-4771443
CIL_0002MF CIL_0002MF_0001 CGP 7:4682309-4794395
CIL_0002MG CIL_0002MG_0001 CGP 7:4737388-4883719

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008219 IEA cell death
GO:0015031 IEA protein transport
GO:0016197 IMP endosomal transport
GO:0030119 NAS AP-type membrane coat adaptor complex
GO:0043565 IEA sequence-specific DNA binding
GO:0044599 IEA AP-5 adaptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078111 ap5z1 adaptor-related protein complex 5, zeta 1 subunit protein_coding Danio_rerio
ENSMUSG00000039623 Ap5z1 adaptor-related protein complex 5, zeta 1 subunit protein_coding Mus_musculus

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