C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uroplakin 3B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000243566 UPK3B 9606 + 7:76510428-76516521 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257632 UPK3B-002 76510525-76515456 protein_coding
  ENST00000334348 UPK3B-001 76510428-76516521 protein_coding
  ENST00000394849 UPK3B-003 76510615-76515456 protein_coding
  ENST00000469114 UPK3B-004 76511535-76514048 retained_intron
  ENST00000490360 UPK3B-005 76510755-76511882 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000257632ENST00000334348ENST00000394849ENST00000469114ENST00000490360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000257632 0.222±0.00 N/A N/A N/A 0.800±0.00 N/A N/A 0.230±0.00 N/A N/A N/A 0.461±0.00 N/A
ENST00000334348 N/A 0.215±0.00 N/A 0.025±0.00 N/A N/A 0.099±0.02 0.099±0.00 0.259±0.00 1.867±0.90 0.592±0.40 0.059±0.00 2.607±0.00
ENST00000394849 1.563±0.00 N/A N/A 0.139±0.00 N/A 0.077±0.00 0.409±0.00 0.612±0.00 0.030±0.00 3.077±0.00 3.599±3.43 0.902±0.96 N/A
ENST00000469114 0.400±0.00 N/A 0.522±0.00 N/A N/A 0.432±0.00 0.303±0.00 N/A 1.210±0.00 N/A 0.734±0.07 0.602±0.42 1.077±0.00
ENST00000490360 N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OE CIL_0000OE_0001 CGP 7:76461676-76516521

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0010629 IMP negative regulation of gene expression
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092872 upk3b uroplakin 3b protein_coding Danio_rerio
ENSMUSG00000042985 Upk3b uroplakin 3B protein_coding Mus_musculus

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