C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear paraspeckle assembly transcript 1 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000245532 NEAT1 9606 + 11:65422774-65445540 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000499732 NEAT1-002 65422774-65424827 lincRNA
  ENST00000501122 NEAT1-001 65422798-65445540 lincRNA
  ENST00000601801 NEAT1-005 65422800-65423368 lincRNA
  ENST00000612303 NEAT1-003 65423285-65424404 lincRNA
  ENST00000616315 NEAT1-004 65425580-65426385 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499732ENST00000501122ENST00000616315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499732 44.470±0.00 127.328±0.00 N/A 44.693±0.00 109.335±0.00 34.393±0.00 34.257±0.00 234.156±0.00 37.137±0.00 111.011±0.00 32.456±0.00 198.977±65.26 34.870±10.79 66.392±34.69
ENST00000501122 6.007±0.00 15.774±0.00 20.439±0.00 4.019±3.62 15.353±0.62 11.061±7.28 5.770±0.98 21.961±0.00 20.598±16.54 30.187±22.29 4.743±2.23 23.834±7.35 5.397±2.52 7.442±3.47
ENST00000616315 55.046±0.00 153.331±0.00 N/A N/A 170.900±0.00 49.910±0.00 N/A 285.406±0.00 64.656±0.00 116.108±0.00 26.945±0.00 412.785±209.79 66.648±26.29 139.345±81.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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