C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000245812 RP11-175K6.1 9606 + 5:159100483-159117478 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000499583 RP11-175K6.1-001 159100682-159117478 lincRNA
  ENST00000517335 RP11-175K6.1-002 159100483-159115323 lincRNA
  ENST00000523301 RP11-175K6.1-003 159100622-159107217 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499583ENST00000517335ENST00000523301
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499583 N/A 0.426±0.00 0.042±0.00 N/A N/A 0.078±0.01 0.079±0.06 0.059±0.01 0.082±0.00 0.038±0.00 0.174±0.10 N/A 0.297±0.06
ENST00000517335 N/A N/A N/A N/A 0.525±0.01 0.195±0.00 N/A N/A N/A N/A N/A 0.774±0.00 0.956±0.00
ENST00000523301 13.173±0.00 9.078±0.00 0.344±0.00 16.581±12.79 2.208±0.46 0.647±0.24 N/A 0.813±0.65 0.409±0.00 0.501±0.00 1.743±0.94 3.173±0.25 5.577±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FV CIL_0008FV_0001 VISTA 5:158500688-159102492
CIL_0007UN CIL_0007UN_0001 VISTA 5:158613954-159215603
CIL_00087L CIL_00087L_0001 VISTA 5:158759112-159360490
CIL_0008X2 CIL_0008X2_0001 VISTA 5:158781834-159383129
CIL_0008O4 CIL_0008O4_0001 VISTA 5:158790777-159391906

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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