C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nucleolar RNA host gene 6 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000245910 SNHG6 9606 - 8:66921684-66926398 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000520348 SNHG6-005 66921684-66925541 lincRNA
  ENST00000520619 SNHG6-004 66922018-66926398 lincRNA
  ENST00000520944 SNHG6-003 66921818-66925596 lincRNA
  ENST00000521127 SNHG6-007 66922271-66925541 retained_intron
  ENST00000521399 SNHG6-006 66921987-66925541 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000520348ENST00000520944ENST00000521127ENST00000521399
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000520348 N/A N/A N/A N/A 1.149±0.00 N/A N/A N/A N/A N/A N/A 18.195±3.00 2.864±0.00 N/A
ENST00000520944 40.803±0.00 47.085±0.00 3.487±0.00 46.287±31.22 20.971±15.59 27.480±21.50 9.791±4.60 10.871±5.77 10.578±2.82 19.229±11.96 37.007±22.23 64.993±47.79 16.529±7.48 29.393±15.04
ENST00000521127 N/A 8.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.132±0.00 N/A N/A
ENST00000521399 34.683±0.00 46.728±0.00 N/A N/A 23.307±0.00 37.432±0.00 26.777±0.00 28.507±0.00 21.281±0.00 64.597±0.00 68.270±0.00 54.583±0.00 17.743±0.05 35.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BJ CIL_0003BJ_0001 CGP 8:66712418-66922048
CIL_0003BI CIL_0003BI_0001 CGP 8:66870749-66962590

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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