C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin gamma subfamily B, 8 pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000248449 PCDHGB8P 9606 + 5:141426286-141429158 unitary_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000502926 PCDHGB8P-002 141426286-141428258 processed_transcript
  ENST00000507007 PCDHGB8P-001 141426286-141429158 unitary_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502926ENST00000507007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502926 N/A N/A 0.569±0.00 N/A N/A 0.764±0.00 0.069±0.00 N/A 0.021±0.00 0.340±0.00 1.056±0.00 N/A 0.020±0.00 N/A
ENST00000507007 0.075±0.00 0.092±0.00 N/A 0.178±0.09 0.300±0.19 0.275±0.15 0.924±0.72 0.103±0.06 0.392±0.37 0.387±0.32 0.114±0.00 0.229±0.28 0.039±0.00 0.196±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000630 CIL_000630_000Q CGP 5:141330571-141512981
CIL_000630 CIL_000630_000P CGP 5:141338760-141512979
CIL_000630 CIL_000630_0012 CGP 5:141343829-141512979
CIL_000630 CIL_000630_0011 CGP 5:141350102-141512979
CIL_000630 CIL_000630_0015 CGP 5:141355025-141512979
CIL_000630 CIL_000630_000Y CGP 5:141360042-141512979
CIL_000630 CIL_000630_000S CGP 5:141364232-141512979
CIL_000630 CIL_000630_0014 CGP 5:141370264-141512979
CIL_000630 CIL_000630_000U CGP 5:141373914-141512979
CIL_000630 CIL_000630_000T CGP 5:141382739-141512979
CIL_000630 CIL_000630_000Z CGP 5:141387698-141512979
CIL_000630 CIL_000630_000V CGP 5:141390157-141512979
CIL_000630 CIL_000630_0016 CGP 5:141397987-141512979
CIL_000630 CIL_000630_0013 CGP 5:141402932-141512979
CIL_000630 CIL_000630_000R CGP 5:141408021-141512979
CIL_000630 CIL_000630_000W CGP 5:141412987-141512979
CIL_000630 CIL_000630_0010 CGP 5:141417645-141512979
CIL_000630 CIL_000630_000X CGP 5:141421047-141512979

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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