C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POU domain class 5, transcription factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000248483 POU5F2 9606 - 5:93734806-93741637 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000510627 POU5F2-001 93740308-93741637 protein_coding
  ENST00000606183 POU5F2-002 93734806-93741123 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungMuscleTestisENST00000510627ENST00000606183
Transcript ID Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000510627 N/A N/A N/A N/A N/A N/A N/A 13.138±7.81
ENST00000606183 1.235±0.00 0.991±0.00 0.442±0.00 0.312±0.00 1.105±0.00 1.669±0.00 0.199±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N1 CIL_0007N1_0003 UCNEbase 5:93009012-93909237
CIL_00083A CIL_00083A_0001 VISTA 5:93175759-93777511
CIL_0005KH CIL_0005KH_0002 CGP 5:93583337-94111699
CIL_0008SK CIL_0008SK_0001 VISTA 5:93591279-94192616
CIL_0004Z9 CIL_0004Z9_0001 CGP 5:93618069-94111699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044774 pou5f3 POU domain, class 5, transcription factor 3 protein_coding Danio_rerio
ENSMUSG00000093668 Pou5f2 POU domain class 5, transcription factor 2 protein_coding Mus_musculus

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