C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 1088
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000249307 LINC01088 9606 + 4:78971748-79308798 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000437737 LINC01088-010 79211681-79245532 antisense
  ENST00000505149 LINC01088-006 79305123-79308798 antisense
  ENST00000507476 LINC01088-005 79195837-79308755 antisense
  ENST00000507761 LINC01088-008 79195836-79227956 antisense
  ENST00000509088 LINC01088-001 78971748-79308544 antisense
  ENST00000510667 LINC01088-004 78971748-79308472 antisense
  ENST00000511241 LINC01088-007 79258781-79308654 antisense
  ENST00000511895 LINC01088-009 79211685-79227886 antisense
  ENST00000512130 LINC01088-003 79197541-79308655 antisense
  ENST00000513153 LINC01088-002 79085239-79308653 antisense
  ENST00000515597 LINC01088-011 79195834-79299565 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511895ENST00000512130ENST00000513153ENST00000515597
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000437737 0.956±0.00 1.768±0.00 N/A N/A 0.575±0.41 N/A N/A 0.928±0.00 0.208±0.00 1.028±0.00 N/A 0.647±0.00 N/A 1.678±0.00
ENST00000505149 N/A N/A N/A 1.431±1.08 N/A 1.422±0.00 N/A N/A N/A 0.237±0.00 N/A N/A 0.383±0.00 0.690±0.00
ENST00000507476 N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A
ENST00000507761 0.282±0.00 N/A 0.050±0.00 N/A 0.372±0.04 N/A 0.271±0.16 0.028±0.00 N/A 0.281±0.00 N/A N/A N/A 1.879±0.00
ENST00000509088 0.388±0.00 0.756±0.00 N/A 1.543±1.06 N/A 1.279±0.00 0.280±0.00 1.434±0.00 N/A 0.325±0.00 N/A 0.333±0.12 0.678±0.24 1.925±0.14
ENST00000510667 N/A N/A N/A N/A 0.533±0.00 1.742±0.00 0.421±0.00 1.402±0.00 0.045±0.00 0.269±0.00 1.451±0.00 0.642±0.15 0.351±0.12 N/A
ENST00000511895 N/A 0.913±0.00 N/A 1.074±0.00 N/A 0.256±0.00 N/A 0.342±0.21 0.064±0.00 0.184±0.00 N/A N/A N/A 0.566±0.00
ENST00000512130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.580±0.00 N/A 0.189±0.00 N/A
ENST00000513153 N/A N/A N/A 1.775±0.00 0.131±0.00 1.411±0.00 0.395±0.00 N/A N/A N/A N/A 0.866±0.67 0.121±0.00 1.487±0.59
ENST00000515597 N/A N/A N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069Z CIL_00069Z_0001 CGP 4:78887127-79326050

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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