C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000249776 RP11-133F8.2 9606 - 5:92410256-92660863 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000512210 RP11-133F8.2-002 92410256-92639497 lincRNA
  ENST00000512284 RP11-133F8.2-001 92553443-92560033 lincRNA
  ENST00000513779 RP11-133F8.2-003 92432203-92660863 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000512210ENST00000512284ENST00000513779
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000512210 N/A 1.441±0.00 0.225±0.00 N/A N/A N/A N/A N/A 0.230±0.00 0.113±0.00
ENST00000512284 N/A N/A 1.412±0.00 0.101±0.00 N/A N/A 2.019±0.00 0.363±0.00 N/A 0.327±0.23
ENST00000513779 0.132±0.00 N/A N/A N/A 0.083±0.00 0.041±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GH CIL_0008GH_0001 VISTA 5:91846639-92448732
CIL_0008G3 CIL_0008G3_0001 VISTA 5:92064417-92665760
CIL_0007XE CIL_0007XE_0001 VISTA 5:92129311-92730422
CIL_0008C5 CIL_0008C5_0001 VISTA 5:92168106-92769000
CIL_0007XV CIL_0007XV_0001 VISTA 5:92192424-92793588
CIL_00083X CIL_00083X_0001 VISTA 5:92292138-92895317
CIL_00095U CIL_00095U_0001 VISTA 5:92305215-92906335
CIL_00089V CIL_00089V_0001 VISTA 5:92334455-92936327
CIL_0007N1 CIL_0007N1_0002 UCNEbase 5:92350421-93009011
CIL_0008PH CIL_0008PH_0001 VISTA 5:92395381-92997490
CIL_0009C4 CIL_0009C4_0001 VISTA 5:92399786-93001254

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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