C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 79
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000249961 CCDC79 9606 - 16:66754976-66801620 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313294 CCDC79-001 66758299-66801620 nonsense_mediated_decay
  ENST00000433154 CCDC79-201 66754976-66801620 protein_coding
  ENST00000558713 CCDC79-003 66754976-66801611 protein_coding
  ENST00000559050 CCDC79-005 66788239-66801584 protein_coding
  ENST00000559403 CCDC79-002 66758304-66759208 protein_coding
  ENST00000561333 CCDC79-004 66767428-66801026 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313294ENST00000433154ENST00000558713ENST00000559050ENST00000559403ENST00000561333
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313294 0.016±0.00 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.354±0.00
ENST00000433154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.892±0.00
ENST00000558713 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.020±0.00 N/A 2.076±0.10
ENST00000559050 N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559403 0.262±0.00 0.939±0.00 0.258±0.00 0.351±0.03 0.331±0.00 0.084±0.00 0.988±0.42 0.060±0.00 0.084±0.00 0.243±0.02 0.161±0.08 0.198±0.00 N/A
ENST00000561333 0.020±0.00 0.143±0.00 0.069±0.00 0.025±0.01 0.031±0.00 0.055±0.00 0.044±0.00 0.039±0.00 0.017±0.00 0.009±0.00 0.020±0.00 N/A 0.946±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0004IU CIL_0004IU_0001 CGP 16:66720893-66801620
CIL_0004IV CIL_0004IV_0001 CGP 16:66754976-66873256

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000781 ISS chromosome, telomeric region
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0007129 ISS synapsis
GO:0045141 ISS meiotic telomere clustering

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058587 ccdc79 coiled-coil domain containing 79 protein_coding Danio_rerio
ENSMUSG00000052616 Ccdc79 coiled-coil domain containing 79 protein_coding Mus_musculus

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