C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IQCJ-SCHIP1 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000250588 IQCJ-SCHIP1 9606 + 3:158962235-159897366 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337808 IQCJ-SCHIP1-008 159273244-159897366 protein_coding
  ENST00000412423 IQCJ-SCHIP1-010 159273755-159897350 protein_coding
  ENST00000460298 IQCJ-SCHIP1-011 159764002-159892541 protein_coding
  ENST00000467377 IQCJ-SCHIP1-014 159763713-159764963 protein_coding
  ENST00000467442 IQCJ-SCHIP1-006 158962235-159764599 processed_transcript
  ENST00000471575 IQCJ-SCHIP1-009 159069252-159764462 protein_coding
  ENST00000472451 IQCJ-SCHIP1-013 159764216-159764890 protein_coding
  ENST00000473061 IQCJ-SCHIP1-012 159765103-159897073 protein_coding
  ENST00000476809 IQCJ-SCHIP1-002 159069264-159896774 protein_coding
  ENST00000481715 IQCJ-SCHIP1-004 159069696-159764706 protein_coding
  ENST00000483486 IQCJ-SCHIP1-003 159069674-159764612 protein_coding
  ENST00000485419 IQCJ-SCHIP1-001 159069264-159897358 protein_coding
  ENST00000488898 IQCJ-SCHIP1-005 159069855-159764511 protein_coding
  ENST00000527095 IQCJ-SCHIP1-007 159273755-159897350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000337808ENST00000412423ENST00000460298ENST00000472451ENST00000473061ENST00000476809ENST00000481715ENST00000485419ENST00000527095
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000337808 N/A N/A 6.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412423 N/A N/A N/A 0.645±0.00 2.591±0.00 N/A N/A 1.761±0.00 8.626±0.00 0.518±0.09 1.016±0.00 N/A
ENST00000460298 N/A 0.384±0.00 N/A N/A 0.387±0.00 N/A N/A N/A N/A 0.242±0.00 N/A N/A
ENST00000472451 N/A 1.549±0.00 N/A N/A N/A N/A N/A N/A N/A 1.705±0.00 N/A N/A
ENST00000473061 2.749±0.00 N/A N/A 2.106±0.00 5.361±0.00 N/A N/A N/A 7.324±0.00 N/A N/A 3.450±0.00
ENST00000476809 1.278±0.00 N/A N/A 1.286±0.04 3.762±0.00 N/A N/A N/A 5.214±0.00 0.941±0.00 N/A N/A
ENST00000481715 N/A N/A N/A N/A N/A N/A 1.180±0.00 N/A N/A N/A N/A N/A
ENST00000485419 N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A 0.341±0.00
ENST00000527095 1.339±0.00 N/A N/A 0.715±0.00 2.066±0.00 16.560±0.00 1.207±0.00 1.065±0.00 N/A 0.920±0.39 N/A 2.679±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000937 CIL_000937_0001 VISTA 3:158468467-159075583

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035175 schip1 schwannomin interacting protein 1 protein_coding Danio_rerio
ENSMUSG00000027777 Schip1 schwannomin interacting protein 1 protein_coding Mus_musculus

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