C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small Cajal body-specific RNA 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000252481 SCARNA13 9606 - 14:95533355-95533629 snoRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000516672 SCARNA13-201 95533355-95533629 snoRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000516672
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000516672 32.531±0.00 49.149±0.00 127.091±0.00 84.907±0.00 27.624±0.00 121.605±0.00 124.873±0.00 117.914±0.00 34.886±0.00 85.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085I CIL_00085I_0001 VISTA 14:95070077-95673144
CIL_00099M CIL_00099M_0001 VISTA 14:95131820-95732594
CIL_0008Z4 CIL_0008Z4_0001 VISTA 14:95131888-95732401
CIL_0007F2 CIL_0007F2_0001 CGP 14:95407266-95544724

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000083738 SCARNA13 Small Cajal body specific RNA 13 snoRNA Danio_rerio
ENSMUSG00000087847 Gm25624 predicted gene, 25624 snoRNA Mus_musculus
ENSMUSG00000088505 Gm26489 predicted gene, 26489 snoRNA Mus_musculus
ENSMUSG00000088789 Scarna13 small Cajal body-specific RNA 1 snoRNA Mus_musculus

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