C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small Cajal body-specific RNA 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000252808 SCARNA4 9606 - 1:155925958-155926086 snoRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000516999 SCARNA4-201 155925958-155926086 snoRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000516999
Transcript ID Adipose Adrenal Bladder Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000516999 0.406±0.00 1.572±0.00 5.547±0.00 11.256±10.14 2.202±1.30 18.056±0.00 111.297±0.00 126.193±0.00 28.447±34.54 1.629±0.00 0.626±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000087716 Gm25825 predicted gene, 25825 snoRNA Mus_musculus
ENSMUSG00000087990 Gm25058 predicted gene, 25058 snoRNA Mus_musculus
ENSMUSG00000088290 Gm26413 predicted gene, 26413 snoRNA Mus_musculus
ENSMUSG00000088604 Gm25820 predicted gene, 25820 snoRNA Mus_musculus
ENSMUSG00000088777 Gm26039 predicted gene, 26039 snoRNA Mus_musculus

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