C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialic acid binding Ig-like lectin 12 (gene/pseudogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000254521 SIGLEC12 9606 - 19:51491357-51501789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291707 SIGLEC12-001 51491364-51501789 protein_coding
  ENST00000596742 SIGLEC12-003 51491357-51501772 nonsense_mediated_decay
  ENST00000598614 SIGLEC12-004 51491641-51500373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000291707ENST00000596742ENST00000598614
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000291707 0.023±0.00 N/A N/A N/A 0.160±0.00 0.285±0.00 N/A N/A N/A N/A 0.220±0.09 N/A N/A
ENST00000596742 N/A 0.255±0.00 N/A 0.107±0.00 0.025±0.00 N/A N/A N/A 0.052±0.00 0.315±0.15 N/A 0.030±0.00 0.024±0.00
ENST00000598614 0.006±0.00 N/A 0.047±0.00 0.200±0.00 N/A N/A 0.044±0.00 0.471±0.00 N/A 0.358±0.00 N/A 0.059±0.00 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038X CIL_00038X_0001 CGP 19:51478622-51501789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089404 SIGLEC8 sialic acid binding Ig-like lectin 8 protein_coding Danio_rerio
ENSMUSG00000030474 Siglece sialic acid binding Ig-like lectin E protein_coding Mus_musculus

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