C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000255458 RP11-539G18.2 9606 + 4:39639140-39666644 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000526807 RP11-539G18.2-002 39653204-39666644 lincRNA
  ENST00000529094 RP11-539G18.2-004 39639140-39651411 lincRNA
  ENST00000529314 RP11-539G18.2-006 39653407-39666568 lincRNA
  ENST00000532680 RP11-539G18.2-005 39639181-39651314 lincRNA
  ENST00000533736 RP11-539G18.2-001 39639140-39652072 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000526807ENST00000529094ENST00000529314ENST00000532680ENST00000533736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000526807 0.239±0.00 0.183±0.00 N/A 0.183±0.01 0.119±0.00 0.027±0.00 0.042±0.00 0.274±0.00 0.026±0.00 0.152±0.00 N/A 0.131±0.03 N/A 6.132±3.61
ENST00000529094 0.374±0.00 1.411±0.00 N/A 1.282±0.00 N/A 0.786±0.00 0.165±0.00 0.234±0.00 0.694±0.00 N/A 0.167±0.00 0.219±0.12 0.139±0.00 6.826±2.18
ENST00000529314 N/A 0.173±0.00 0.701±0.00 0.197±0.00 0.164±0.00 0.106±0.00 0.018±0.00 0.158±0.00 0.034±0.00 0.318±0.00 N/A 0.085±0.01 0.103±0.00 N/A
ENST00000532680 N/A N/A 0.129±0.00 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A 0.103±0.03 N/A N/A
ENST00000533736 0.210±0.00 0.497±0.00 0.070±0.00 N/A N/A N/A 0.071±0.00 0.268±0.00 0.049±0.00 0.136±0.00 0.144±0.00 0.060±0.02 0.052±0.00 0.620±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TW CIL_0002TW_0002 CGP 4:39546330-39782792

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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