C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000255864 RP11-444D3.1 9606 - 12:24213256-24562590 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000429944 RP11-444D3.1-003 24277250-24562493 lincRNA
  ENST00000446891 RP11-444D3.1-006 24213342-24562487 lincRNA
  ENST00000456299 RP11-444D3.1-002 24331286-24562544 lincRNA
  ENST00000536729 RP11-444D3.1-005 24213343-24357430 lincRNA
  ENST00000538905 RP11-444D3.1-004 24367935-24562382 lincRNA
  ENST00000540811 RP11-444D3.1-001 24213256-24562590 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429944ENST00000446891ENST00000456299ENST00000536729ENST00000538905ENST00000540811
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A 0.428±0.00 N/A
ENST00000446891 0.354±0.00 0.110±0.00 N/A 3.531±2.94 7.107±0.00 1.567±0.93 0.522±0.36 N/A 1.761±1.51 0.468±0.00 1.016±0.00 5.464±4.26 0.761±0.00 0.781±0.00
ENST00000456299 N/A N/A N/A N/A N/A N/A N/A N/A 1.938±0.00 N/A N/A N/A N/A 0.028±0.00
ENST00000536729 0.826±0.00 N/A 14.149±0.00 27.243±0.00 6.703±0.00 5.858±0.00 N/A 13.773±0.00 16.069±15.97 N/A N/A 5.172±4.78 N/A N/A
ENST00000538905 0.113±0.00 N/A 1.106±0.00 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 0.071±0.00 0.040±0.00
ENST00000540811 N/A 0.153±0.00 1.692±0.00 1.836±0.00 2.268±1.79 N/A 1.329±0.00 4.199±0.00 1.600±1.53 0.157±0.00 N/A 1.745±1.23 0.292±0.05 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NR CIL_0007NR_0001 UCNEbase 12:22767069-24538480
CIL_0004XB CIL_0004XB_0001 CGP 12:23529500-24949459
CIL_00089K CIL_00089K_0001 VISTA 12:23780950-24382700
CIL_0007UK CIL_0007UK_0001 VISTA 12:23838078-24439790

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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