C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000440939}
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000256591 RP11-286N22.8 9606 + 11:61429220-61485822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000536670 RP11-286N22.8-004 61430121-61468716 retained_intron
  ENST00000538594 RP11-286N22.8-007 61430125-61484727 nonsense_mediated_decay
  ENST00000541135 RP11-286N22.8-003 61430056-61481842 protein_coding
  ENST00000543044 RP11-286N22.8-006 61430150-61482398 nonsense_mediated_decay
  ENST00000544025 RP11-286N22.8-001 61429220-61481879 processed_transcript
  ENST00000544801 RP11-286N22.8-002 61430126-61484762 nonsense_mediated_decay
  ENST00000544880 RP11-286N22.8-005 61430143-61485822 processed_transcript
  ENST00000623232 RP11-286N22.8-008 61430124-61436135 TEC

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleOvaryPlacentaENST00000536670ENST00000543044
Transcript ID Brain Heart Kidney Liver Muscle Ovary Placenta
ENST00000536670 18.580±0.00 4.583±0.00 11.785±0.00 12.569±0.00 N/A 9.599±0.00 19.119±0.00
ENST00000543044 N/A 13.516±0.00 N/A N/A 4.252±0.00 N/A 12.889±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0018293 IEA protein-FAD linkage

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062971 sdhaf2 succinate dehydrogenase complex assembly factor 2 protein_coding Danio_rerio
ENSMUSG00000024668 Sdhaf2 succinate dehydrogenase complex assembly factor 2 protein_coding Mus_musculus

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