C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000257771 RP11-70F11.8 9606 + 12:49911953-49930320 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000546821 RP11-70F11.8-001 49911953-49926339 lincRNA
  ENST00000547443 RP11-70F11.8-003 49925000-49930010 lincRNA
  ENST00000547954 RP11-70F11.8-002 49924358-49926489 lincRNA
  ENST00000549734 RP11-70F11.8-005 49911980-49920518 lincRNA
  ENST00000551539 RP11-70F11.8-004 49929398-49930320 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000546821ENST00000547443ENST00000547954ENST00000549734ENST00000551539
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000546821 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A
ENST00000547443 N/A 0.279±0.00 N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A 4.964±0.00
ENST00000547954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.637±0.00
ENST00000549734 0.530±0.00 0.253±0.00 0.392±0.00 0.534±0.00 0.209±0.00 0.024±0.00 0.255±0.00 0.181±0.00 0.206±0.00 0.404±0.00 0.206±0.13 0.066±0.00 N/A
ENST00000551539 N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A 1.567±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IN CIL_0000IN_0001 CGP 12:49866896-49958881
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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