C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 34
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000258659 TRIM34 9606 + 11:5619764-5644398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000429814 TRIM34-001 5624983-5644398 protein_coding
  ENST00000491385 TRIM34-004 5632281-5641298 retained_intron
  ENST00000495668 TRIM34-005 5634838-5643809 processed_transcript
  ENST00000514226 TRIM34-003 5619764-5644398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429814ENST00000491385ENST00000495668ENST00000514226
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429814 N/A 3.083±0.00 0.164±0.00 1.091±0.39 1.044±0.00 0.265±0.00 0.239±0.00 N/A 0.648±0.00 N/A 2.359±1.19 3.267±1.31 1.377±0.00
ENST00000491385 N/A N/A N/A 1.237±0.00 1.037±0.00 N/A 0.502±0.00 N/A 1.045±0.07 0.352±0.00 0.979±0.00 N/A N/A
ENST00000495668 N/A N/A 0.444±0.00 N/A N/A N/A N/A N/A N/A N/A 2.520±0.00 N/A N/A
ENST00000514226 0.840±0.00 1.600±0.00 0.301±0.00 1.427±0.00 N/A 0.618±0.00 N/A 0.630±0.00 0.321±0.00 0.163±0.00 0.506±0.00 2.114±0.89 1.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R8 CIL_0003R8_0002 CGP 11:5248083-5645789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0070206 IDA protein trimerization

Homologs

No Homologs available.

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