C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TVP23C-CDRT4 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000259024 TVP23C-CDRT4 9606 - 17:15436021-15563561 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000481756 TVP23C-CDRT4-003 15438064-15563472 nonsense_mediated_decay
  ENST00000518506 TVP23C-CDRT4-004 15438141-15563448 nonsense_mediated_decay
  ENST00000522212 TVP23C-CDRT4-001 15436021-15563561 protein_coding
  ENST00000557349 TVP23C-CDRT4-002 15437888-15563559 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungMusclePlacentaENST00000522212
Transcript ID Breast Colon Heart Liver Lung Muscle Placenta
ENST00000522212 1.289±0.00 1.051±0.00 0.278±0.00 1.195±0.00 0.971±0.00 0.352±0.00 3.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001804 zgc:112148 zgc:112148 protein_coding Danio_rerio
ENSDARG00000057060 tvp23b trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) protein_coding Danio_rerio

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