C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox B7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000260027 HOXB7 9606 - 17:48607227-48633572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000239165 HOXB7-001 48607227-48611020 protein_coding
  ENST00000467314 HOXB7-003 48607716-48608326 processed_transcript
  ENST00000567101 HOXB7-008 48607627-48633572 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000239165ENST00000467314ENST00000567101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000239165 5.586±0.00 3.904±0.00 0.692±0.00 0.054±0.00 2.804±2.07 6.028±0.00 0.277±0.00 21.126±0.00 0.240±0.16 0.960±0.00 0.233±0.00 3.095±2.45 4.040±1.99 4.504±4.13
ENST00000467314 3.568±0.00 5.885±0.00 N/A 1.615±0.00 7.861±0.00 3.724±0.00 0.942±0.00 N/A 0.626±0.00 3.691±0.00 0.490±0.00 6.114±4.66 4.385±0.00 4.487±2.78
ENST00000567101 N/A N/A 0.568±0.00 N/A 0.337±0.00 N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0007275 NAS multicellular organismal development
GO:0009952 IEA anterior/posterior pattern specification
GO:0030099 IEA myeloid cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0090190 IEA positive regulation of branching involved in ureteric bud morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056030 hoxb7a homeo box B7a protein_coding Danio_rerio
ENSMUSG00000038721 Hoxb7 homeobox B7 protein_coding Mus_musculus

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