C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 58, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000262919 FAM58A 9606 - X:153587919-153600045 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000429336 FAM58A-005 153588055-153596063 protein_coding
  ENST00000440428 FAM58A-007 153587932-153599117 protein_coding
  ENST00000482182 FAM58A-011 153592612-153600045 protein_coding
  ENST00000576892 FAM58A-006 153587919-153599186 protein_coding
  ENST00000614850 FAM58A-003 153588163-153599054 protein_coding
  ENST00000614851 FAM58A-004 153587927-153599031 nonsense_mediated_decay
  ENST00000620088 FAM58A-001 153587932-153599117 nonsense_mediated_decay
  ENST00000621629 FAM58A-010 153587932-153599117 nonsense_mediated_decay
  ENST00000621817 FAM58A-009 153592575-153599116 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429336ENST00000440428ENST00000482182ENST00000576892ENST00000614850ENST00000614851ENST00000620088ENST00000621629ENST00000621817
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.688±0.00 7.909±0.00 2.702±0.00
ENST00000440428 5.259±0.00 7.025±0.00 N/A 3.281±0.75 3.914±0.00 2.092±0.00 6.084±0.00 N/A 4.137±0.00 5.431±0.00 9.741±0.00 5.190±2.49 12.731±2.34 4.829±0.24
ENST00000482182 N/A N/A N/A N/A N/A N/A N/A 0.590±0.00 N/A N/A N/A N/A N/A N/A
ENST00000576892 0.634±0.00 N/A 1.211±0.00 5.444±0.00 2.389±1.49 1.935±0.29 2.483±0.67 N/A 1.040±0.00 1.991±0.64 2.210±0.25 3.677±0.45 6.306±0.00 N/A
ENST00000614850 N/A N/A N/A N/A N/A 2.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614851 N/A N/A N/A N/A N/A 0.950±0.00 N/A 1.016±0.00 N/A 0.318±0.00 N/A 2.982±1.76 N/A N/A
ENST00000620088 N/A 4.525±0.00 N/A 11.626±0.00 3.076±0.00 2.184±0.00 5.927±0.00 9.234±0.00 2.506±0.00 N/A N/A 14.536±0.00 10.552±0.00 2.249±0.00
ENST00000621629 N/A N/A N/A N/A N/A N/A 1.630±0.00 1.504±0.00 N/A N/A N/A 3.084±0.00 5.468±1.41 0.872±0.00
ENST00000621817 N/A N/A 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GH CIL_0007GH_0002 CGP X:153517676-153600045

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0019901 IEA protein kinase binding
GO:0030295 IEA protein kinase activator activity
GO:0043410 IEA positive regulation of MAPK cascade
GO:0045860 IEA positive regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037537 fam58a family with sequence similarity 58, member A protein_coding Danio_rerio
ENSMUSG00000049489 Fam58b family with sequence similarity 58, member B protein_coding Mus_musculus

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