C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 909
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000264247 LINC00909 9606 - 18:74591774-74598508 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000577806 LINC00909-004 74593201-74597569 lincRNA
  ENST00000580048 LINC00909-001 74591774-74597824 lincRNA
  ENST00000581192 LINC00909-002 74593696-74598508 lincRNA
  ENST00000585279 LINC00909-003 74593149-74597800 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000577806ENST00000580048ENST00000581192ENST00000585279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000577806 N/A 2.246±0.00 N/A 1.405±0.00 N/A 0.851±0.00 N/A 0.559±0.00 N/A N/A N/A 1.579±0.28 0.606±0.14 0.609±0.00
ENST00000580048 0.578±0.00 1.319±0.00 0.409±0.00 1.101±0.62 0.715±0.19 0.457±0.01 0.802±0.11 1.076±0.69 0.471±0.04 0.270±0.01 0.747±0.00 1.422±0.74 0.763±0.21 0.993±0.01
ENST00000581192 N/A N/A 1.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585279 N/A N/A N/A 1.431±0.00 N/A N/A 0.906±0.43 1.597±0.13 0.700±0.00 0.469±0.13 N/A 0.823±0.00 0.620±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E6 CIL_0008E6_0001 VISTA 18:74345519-74946377
CIL_0008E7 CIL_0008E7_0001 VISTA 18:74350564-74952254
CIL_0008CN CIL_0008CN_0001 VISTA 18:74434936-75037805
CIL_0008EA CIL_0008EA_0001 VISTA 18:74496006-75098339
CIL_00088P CIL_00088P_0001 VISTA 18:74555716-75157326

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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