C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000264920 RP11-6N17.4 9606 - 17:47891255-47895812 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000577279 RP11-6N17.4-002 47891275-47895769 lincRNA
  ENST00000580459 RP11-6N17.4-003 47891854-47895792 retained_intron
  ENST00000582787 RP11-6N17.4-001 47891255-47895812 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000577279ENST00000580459ENST00000582787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000577279 2.213±0.00 N/A 2.089±0.00 0.243±0.00 1.034±0.00 1.696±0.05 N/A 1.493±0.00 0.754±0.00 1.004±0.00 N/A N/A N/A N/A
ENST00000580459 0.121±0.00 0.335±0.00 0.046±0.00 0.276±0.00 0.175±0.00 0.204±0.00 N/A 0.106±0.03 0.071±0.00 0.044±0.00 N/A 0.098±0.03 0.072±0.00 0.391±0.00
ENST00000582787 0.861±0.00 3.466±0.00 N/A 3.556±2.10 2.706±1.97 1.545±0.00 16.061±7.81 2.637±0.71 1.279±0.43 2.762±0.00 13.455±3.59 3.103±1.19 6.436±0.55 12.792±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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