C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 488
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000265763 ZNF488 9606 - 10:47365496-47384273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000585316 ZNF488-001 47365496-47384273 protein_coding
  ENST00000591025 ZNF488-201 47365502-47384261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000585316ENST00000591025
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000585316 N/A 0.021±0.00 0.189±0.00 7.777±6.26 0.236±0.00 N/A N/A 0.395±0.00 0.111±0.03 0.682±0.42 1.346±0.51 0.337±0.16
ENST00000591025 0.021±0.00 N/A N/A 1.679±0.00 0.216±0.00 0.145±0.00 0.053±0.03 N/A N/A 0.384±0.00 0.374±0.09 0.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IF CIL_0000IF_0001 CGP 10:47348371-47384273

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0014003 IBA oligodendrocyte development
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048714 IEA positive regulation of oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025017 prdm8 PR domain containing 8 protein_coding Danio_rerio
ENSMUSG00000044519 Zfp488 zinc finger protein 488 protein_coding Mus_musculus

Loading