C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000267284 RP11-397A16.1 9606 + 18:55721063-55788761 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000587346 RP11-397A16.1-001 55721396-55784944 lincRNA
  ENST00000589662 RP11-397A16.1-002 55721318-55788761 lincRNA
  ENST00000592936 RP11-397A16.1-003 55721063-55759122 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587346ENST00000589662ENST00000592936
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587346 N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A 0.214±0.00 N/A
ENST00000589662 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.695±0.13 N/A
ENST00000592936 0.884±0.00 0.541±0.28 0.787±0.00 0.861±0.00 0.721±0.00 1.342±0.00 1.397±1.18 0.185±0.00 0.628±0.71 0.390±0.06 0.223±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DW CIL_0008DW_0001 VISTA 18:55122394-55723848
CIL_0007L3 CIL_0007L3_0001 UCNEbase 18:55336781-56296648
CIL_000821 CIL_000821_0001 VISTA 18:55563437-56164650
CIL_0008QS CIL_0008QS_0001 VISTA 18:55600648-56201591

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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