C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Spi-B transcription factor (Spi-1/PU.1 related)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000269404 SPIB 9606 + 19:50418938-50431313 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000270632 SPIB-003 50418958-50428989 protein_coding
  ENST00000439922 SPIB-201 50418938-50431048 protein_coding
  ENST00000594188 SPIB-005 50418941-50423197 retained_intron
  ENST00000594685 SPIB-006 50418954-50423027 protein_coding
  ENST00000595883 SPIB-001 50418938-50431313 protein_coding
  ENST00000596074 SPIB-002 50418941-50428587 protein_coding
  ENST00000597855 SPIB-007 50418941-50428124 protein_coding
  ENST00000599923 SPIB-004 50418939-50422975 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverMuscleENST00000270632ENST00000439922
Transcript ID Adrenal Brain Breast Colon Kidney Liver Muscle
ENST00000270632 30.257±0.00 N/A N/A 1.960±0.94 N/A N/A N/A
ENST00000439922 4.594±0.00 0.383±0.00 0.190±0.00 0.726±0.22 0.475±0.00 0.127±0.02 0.165±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0005737 TAS cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000008193 Spib Spi-B transcription factor (Spi-1/PU.1 related) protein_coding Mus_musculus

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