C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 2, H4b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000270276 HIST2H4B 9606 - 1:149854045-149861210 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000579512 HIST2H4B-004 149860079-149861210 protein_coding
  ENST00000612061 HIST2H4B-002 149859185-149861148 nonsense_mediated_decay
  ENST00000621520 HIST2H4B-003 149854045-149861138 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungMuscleTestisENST00000579512
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Muscle Testis
ENST00000579512 0.069±0.00 0.072±0.00 0.040±0.00 0.232±0.00 0.150±0.00 0.310±0.00 0.302±0.00 0.031±0.00 0.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0004 CGP 1:149842188-149886652
CIL_0000UC CIL_0000UC_0005 CGP 1:149842204-149886652

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000278 TAS mitotic cell cycle
GO:0000723 TAS telomere maintenance
GO:0000786 TAS:IEA nucleosome
GO:0003677 TAS:IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006352 IEA DNA-templated transcription, initiation
GO:0016020 IDA membrane
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035574 TAS histone H4-K20 demethylation
GO:0035575 TAS histone demethylase activity (H4-K20 specific)
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087236 si:ch211-113a14.26 histone cluster 2, H4b protein_coding Danio_rerio
ENSDARG00000087472 si:ch211-113a14.13 histone cluster 2, H4b protein_coding Danio_rerio

Loading