C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 2, H4a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000270882 HIST2H4A 9606 + 1:149832659-149839767 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000578186 HIST2H4A-004 149832659-149833241 protein_coding
  ENST00000613412 HIST2H4A-002 149832678-149839767 nonsense_mediated_decay
  ENST00000614272 HIST2H4A-003 149832670-149834631 nonsense_mediated_decay
  ENST00000618193 HIST2H4A-001 149832668-149834484 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000614272ENST00000618193
Transcript ID Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000614272 0.018±0.00 0.017±0.00 0.033±0.00 0.033±0.00 0.093±0.00 N/A 0.205±0.12 0.063±0.01 0.038±0.00
ENST00000618193 N/A N/A N/A N/A N/A 0.009±0.00 N/A 0.026±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000278 TAS mitotic cell cycle
GO:0000723 TAS telomere maintenance
GO:0000786 TAS:IEA nucleosome
GO:0003677 TAS:IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006352 IEA DNA-templated transcription, initiation
GO:0016020 IDA membrane
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035574 TAS histone H4-K20 demethylation
GO:0035575 TAS histone demethylase activity (H4-K20 specific)
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090521 histone cluster 2, H4a protein_coding Danio_rerio

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