C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FAM47E-STBD1 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000272414 FAM47E-STBD1 9606 + 4:76251721-76311129 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000509377 FAM47E-STBD1-003 76251733-76310044 nonsense_mediated_decay
  ENST00000514140 FAM47E-STBD1-001 76263812-76311129 protein_coding
  ENST00000514365 FAM47E-STBD1-002 76251732-76310379 nonsense_mediated_decay
  ENST00000515604 FAM47E-STBD1-004 76251721-76311120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000509377ENST00000514140ENST00000514365ENST00000515604
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000509377 N/A 0.505±0.00 N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A
ENST00000514140 2.345±0.00 N/A N/A 2.225±0.00 0.997±0.00 1.507±0.00 N/A N/A 3.788±1.14 3.051±1.55 3.103±0.00
ENST00000514365 1.706±0.00 N/A N/A N/A N/A N/A 2.333±0.00 N/A 4.475±0.00 6.419±0.00 3.305±0.00
ENST00000515604 N/A N/A 3.165±0.00 N/A N/A N/A N/A 4.751±0.00 0.755±0.00 N/A 2.772±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0001 VISTA 4:76031495-76631676
CIL_00071J CIL_00071J_0001 CGP 4:76158737-76283780
CIL_0001YY CIL_0001YY_0002 CGP 4:76214040-76311129
CIL_00071I CIL_00071I_0001 CGP 4:76251721-76311599

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067694 zgc:158260 zgc:158260 protein_coding Danio_rerio
ENSDARG00000089020 zgc:158260 zgc:158260 protein_coding Danio_rerio
ENSMUSG00000057068 Fam47e family with sequence similarity 47, member E protein_coding Mus_musculus

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