C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family member 3B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000274808 TBC1D3B 9606 - 17:36165624-36264527 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000610580 TBC1D3B-003 36172886-36176592 nonsense_mediated_decay
  ENST00000611257 TBC1D3B-001 36165681-36176595 protein_coding
  ENST00000615673 TBC1D3B-201 36165624-36264527 protein_coding
  ENST00000616006 TBC1D3B-004 36172294-36176636 protein_coding
  ENST00000622280 TBC1D3B-005 36170071-36172652 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610580ENST00000611257ENST00000615673ENST00000616006ENST00000622280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610580 0.230±0.00 0.374±0.00 0.223±0.00 0.532±0.00 0.622±0.00 0.412±0.00 0.507±0.00 N/A 0.197±0.00 1.140±0.00 0.112±0.00 0.256±0.12 0.357±0.00 1.495±0.82
ENST00000611257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00
ENST00000615673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00
ENST00000616006 0.263±0.00 0.933±0.00 1.126±0.00 0.620±0.26 0.381±0.00 0.328±0.00 0.303±0.00 1.901±1.56 0.693±0.62 0.906±0.38 N/A 0.922±0.74 N/A 1.771±1.30
ENST00000622280 0.169±0.00 N/A N/A 0.352±0.12 0.487±0.00 0.394±0.09 0.309±0.05 0.500±0.00 0.213±0.15 0.720±0.36 0.617±0.00 0.535±0.39 0.301±0.08 0.563±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011088 si:ch211-288d18.1 si:ch211-288d18.1 protein_coding Danio_rerio
ENSDARG00000051836 si:dkeyp-19e1.3 si:dkeyp-19e1.3 protein_coding Danio_rerio

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