C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-C motif) ligand 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000275152 CCL16 9606 - 17:35976493-35981496 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000610493 CCL16-004 35976568-35981461 nonsense_mediated_decay
  ENST00000611905 CCL16-001 35976499-35981496 protein_coding
  ENST00000613642 CCL16-002 35976493-35978263 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610493ENST00000611905ENST00000613642
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610493 0.288±0.00 0.725±0.00 0.157±0.00 0.353±0.00 0.575±0.00 0.261±0.00 0.189±0.00 0.383±0.00 N/A 0.195±0.00 0.091±0.00 0.077±0.04 0.022±0.00 0.249±0.10
ENST00000611905 N/A N/A N/A N/A 0.066±0.00 0.071±0.01 N/A 14.074±0.00 19.572±0.00 N/A N/A 0.016±0.00 N/A N/A
ENST00000613642 N/A N/A N/A N/A 0.078±0.00 0.212±0.00 N/A N/A 9.958±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 TAS:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006935 TAS chemotaxis
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0007154 TAS cell communication
GO:0007267 TAS cell-cell signaling
GO:0008009 IEA chemokine activity
GO:0042056 IDA chemoattractant activity
GO:0050918 IDA positive chemotaxis
GO:0060326 IEA cell chemotaxis

Homologs

No Homologs available.

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