C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, gamma complex associated protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000275835 TUBGCP5 9606 - 15:22983192-23039673 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000610294 TUBGCP5-005 23005432-23008881 protein_coding
  ENST00000612085 TUBGCP5-009 23026123-23036964 protein_coding
  ENST00000613552 TUBGCP5-006 23005799-23008797 retained_intron
  ENST00000614508 TUBGCP5-008 22983192-23039569 nonsense_mediated_decay
  ENST00000615383 TUBGCP5-001 22999176-23039673 protein_coding
  ENST00000615455 TUBGCP5-003 23009960-23024376 processed_transcript
  ENST00000620238 TUBGCP5-007 23003091-23004570 retained_intron
  ENST00000620435 TUBGCP5-002 23000284-23039572 protein_coding
  ENST00000622507 TUBGCP5-004 23026177-23036948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610294ENST00000612085ENST00000614508ENST00000615383ENST00000615455ENST00000620435ENST00000622507
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610294 N/A N/A N/A N/A N/A N/A N/A N/A 0.827±0.00 N/A N/A N/A N/A
ENST00000612085 N/A N/A 3.716±0.00 2.013±0.00 1.787±0.00 0.976±0.00 1.182±0.00 N/A 1.845±0.00 N/A 3.665±0.00 N/A N/A
ENST00000614508 N/A N/A 1.031±0.00 0.681±0.00 N/A 0.334±0.11 N/A 0.500±0.00 0.262±0.00 N/A N/A N/A N/A
ENST00000615383 1.782±0.00 3.899±0.00 2.794±2.06 2.406±0.00 N/A 0.478±0.04 0.732±0.48 1.277±0.00 0.557±0.08 0.918±0.00 2.846±0.51 2.405±1.11 6.089±1.84
ENST00000615455 N/A N/A N/A N/A N/A N/A N/A 1.358±0.00 N/A N/A N/A N/A N/A
ENST00000620435 N/A N/A 2.595±0.00 N/A N/A N/A N/A N/A 0.948±0.00 0.277±0.00 N/A 0.472±0.00 N/A
ENST00000622507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.125±0.00 N/A 14.259±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000278 TAS mitotic cell cycle
GO:0000922 IEA spindle pole
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007020 IDA microtubule nucleation
GO:0008017 IDA microtubule binding
GO:0008274 IDA gamma-tubulin ring complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077442 tubgcp5 tubulin, gamma complex associated protein 5 protein_coding Danio_rerio
ENSMUSG00000033790 Tubgcp5 tubulin, gamma complex associated protein 5 protein_coding Mus_musculus

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