C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H19, imprinted maternally expressed transcript
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000031 H19 10090 - 7:142575529-142578143 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000132294 H19-003 142576296-142576910 lincRNA
  ENSMUST00000136359 H19-001 142575529-142578143 lincRNA
  ENSMUST00000140716 H19-004 142575634-142576538 lincRNA
  ENSMUST00000149974 H19-002 142576507-142578095 lincRNA
  ENSMUST00000152754 H19-005 142575558-142578120 lincRNA

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132294ENSMUST00000136359ENSMUST00000140716ENSMUST00000149974ENSMUST00000152754
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132294 N/A N/A N/A 0.075±0.00 N/A 0.322±0.00 N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136359 2.347±1.60 0.494±0.19 1.193±0.28 147.067±14.56 28.374±30.47 N/A 10.805±5.35 7.557±6.14 1154.055±1336.18 38.938±27.47 163.684±31.78 4.176±1.41 2823.768±1334.49 0.527±0.25
ENSMUST00000140716 N/A 0.305±0.06 N/A 0.034±0.00 90.669±0.00 0.040±0.00 N/A N/A 0.320±0.15 N/A N/A N/A N/A N/A
ENSMUST00000149974 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A 0.215±0.00 N/A 4.988±0.00 2730.435±183.20 0.520±0.00
ENSMUST00000152754 0.864±0.45 0.334±0.13 N/A N/A 64.159±60.15 0.116±0.04 5.884±0.65 2.351±2.18 108.024±186.93 11.997±11.54 N/A 4.799±1.69 1294.733±349.54 0.284±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_0005N8 CIL_0005N8_0003 CGP 7:142532799-142666816

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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