C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin beta 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000157 Itgb2l 10090 - 16:96422288-96443619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000161 Itgb2l-001 96422288-96443619 protein_coding
  ENSMUST00000113773 Itgb2l-002 96422376-96443612 protein_coding
  ENSMUST00000131567 Itgb2l-003 96422292-96443614 nonsense_mediated_decay
  ENSMUST00000131777 Itgb2l-004 96426730-96429144 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000000161ENSMUST00000113773ENSMUST00000131567ENSMUST00000131777
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000161 N/A N/A 0.016±0.00 N/A N/A 0.010±0.00 2.707±2.78 N/A N/A 0.074±0.02 0.012±0.00 N/A
ENSMUST00000113773 0.039±0.00 0.218±0.00 0.011±0.00 0.113±0.02 0.182±0.00 N/A 1.073±1.51 0.046±0.00 N/A 0.053±0.01 0.024±0.00 0.017±0.00
ENSMUST00000131567 0.026±0.00 0.083±0.00 0.028±0.00 0.086±0.03 0.238±0.00 N/A N/A 0.012±0.00 0.017±0.00 0.125±0.07 0.017±0.00 0.014±0.00
ENSMUST00000131777 N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A 0.240±0.05 0.135±0.04 0.125±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GD CIL_0003GD_0002 CGP 16:96235801-96525580

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005886 IEA plasma membrane
GO:0006954 IEA inflammatory response
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016939 itgb2 integrin, beta 2 protein_coding Danio_rerio

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