C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetraspanin 32
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000244 Tspan32 10090 + 7:143005046-143019644 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009396 Tspan32-001 143005046-143019486 protein_coding
  ENSMUST00000075172 Tspan32-003 143005638-143019644 protein_coding
  ENSMUST00000082008 Tspan32-006 143005685-143019486 protein_coding
  ENSMUST00000105923 Tspan32-005 143005671-143019486 protein_coding
  ENSMUST00000105924 Tspan32-009 143005699-143019486 protein_coding
  ENSMUST00000105925 Tspan32-008 143005699-143019486 protein_coding
  ENSMUST00000141186 Tspan32-002 143005060-143007488 retained_intron
  ENSMUST00000143512 Tspan32-011 143005928-143017673 protein_coding
  ENSMUST00000145212 Tspan32-004 143005663-143019483 nonsense_mediated_decay
  ENSMUST00000154264 Tspan32-010 143017409-143018903 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009396ENSMUST00000075172ENSMUST00000082008ENSMUST00000105923ENSMUST00000105924ENSMUST00000105925ENSMUST00000141186ENSMUST00000143512ENSMUST00000145212ENSMUST00000154264
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009396 0.751±0.17 0.354±0.14 0.350±0.03 0.078±0.00 7.018±2.27 0.638±0.35 0.228±0.16 0.415±0.22 8.841±6.36 1.924±0.98 0.415±0.37 0.318±0.19 0.691±0.26 0.070±0.04
ENSMUST00000075172 0.720±0.00 0.171±0.00 0.133±0.00 0.019±0.00 5.614±3.15 0.547±0.16 0.221±0.05 0.190±0.13 2.276±2.99 1.527±0.41 N/A 0.258±0.11 N/A N/A
ENSMUST00000082008 0.601±0.22 0.194±0.11 0.250±0.02 0.098±0.00 3.780±0.62 0.367±0.07 0.257±0.00 0.343±0.07 9.414±8.30 0.991±0.18 0.370±0.00 0.507±0.28 0.844±0.32 N/A
ENSMUST00000105923 0.411±0.08 0.536±0.12 0.325±0.00 N/A N/A 0.871±0.00 0.242±0.06 0.254±0.11 N/A N/A N/A 0.551±0.04 0.380±0.00 N/A
ENSMUST00000105924 N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A 0.090±0.00 N/A N/A 0.262±0.00 0.267±0.19 N/A
ENSMUST00000105925 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A 0.091±0.04 0.599±0.60 0.352±0.21 0.027±0.00
ENSMUST00000141186 N/A 0.144±0.00 N/A N/A N/A 0.427±0.00 N/A N/A 0.302±0.07 N/A N/A 0.248±0.00 0.458±0.00 N/A
ENSMUST00000143512 N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.06 N/A 0.140±0.00 0.470±0.21 N/A 0.083±0.00
ENSMUST00000145212 N/A 0.105±0.00 N/A 0.043±0.00 N/A N/A 0.120±0.00 0.222±0.00 N/A N/A 0.098±0.00 0.240±0.00 N/A N/A
ENSMUST00000154264 N/A 0.619±0.00 N/A N/A N/A N/A 0.211±0.00 1.078±0.00 N/A N/A N/A 0.354±0.05 0.410±0.00 0.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BT CIL_0009BT_0002 VISTA 7:142749845-143351046
CIL_0008VI CIL_0008VI_0002 VISTA 7:142812060-143412968
CIL_0008FP CIL_0008FP_0002 VISTA 7:142853813-143455333
CIL_0008A3 CIL_0008A3_0002 VISTA 7:142895498-143499796
CIL_00048A CIL_00048A_0002 CGP 7:143005046-143067934

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IDA intracellular
GO:0007010 IMP cytoskeleton organization
GO:0007229 IMP integrin-mediated signaling pathway
GO:0007596 IMP blood coagulation
GO:0007599 IMP hemostasis
GO:0008285 IGI negative regulation of cell proliferation
GO:0009986 IDA cell surface
GO:0030886 IGI negative regulation of myeloid dendritic cell activation
GO:0042832 IGI defense response to protozoan
GO:0050688 IGI regulation of defense response to virus
GO:0070442 IDA integrin alphaIIb-beta3 complex
GO:0070527 IMP platelet aggregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000064201 TSPAN32 tetraspanin 32 protein_coding Homo_sapiens

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