C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: crystallin, beta A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000724 Cryba1 10090 - 11:77718615-77725283 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078623 Cryba1-001 77718627-77725283 protein_coding
  ENSMUST00000124178 Cryba1-002 77718615-77721834 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000078623ENSMUST00000124178
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000078623 N/A N/A 0.013±0.00 0.038±0.00 0.133±0.03 N/A 0.026±0.02 N/A 0.171±0.00 N/A N/A
ENSMUST00000124178 0.035±0.00 0.103±0.00 0.018±0.01 0.039±0.00 N/A 0.031±0.00 0.019±0.01 0.040±0.00 0.225±0.00 0.036±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002088 IEA lens development in camera-type eye
GO:0005212 TAS structural constituent of eye lens
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007601 IEA visual perception
GO:0042803 IPI protein homodimerization activity
GO:0043010 IMP camera-type eye development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041141 cryba1a crystallin, beta A1a protein_coding Danio_rerio
ENSDARG00000053875 cryba1b crystallin, beta A1b protein_coding Danio_rerio
ENSG00000108255 CRYBA1 crystallin, beta A1 protein_coding Homo_sapiens

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