C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | spastic paraplegia 7 homolog (human) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSMUSG00000000738  |
Spg7 | 10090 | + |
8:123062942-123097760  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSMUST00000108868 |
Spg7-201 | 123065281-123097649 | protein_coding | ||
| ENSMUST00000125975 |
Spg7-003 | 123062988-123097760 | protein_coding | ||
| ENSMUST00000128234 |
Spg7-005 | 123080781-123097753 | protein_coding | ||
| ENSMUST00000128803 |
Spg7-002 | 123065508-123097751 | retained_intron | ||
| ENSMUST00000130787 |
Spg7-009 | 123087238-123093658 | retained_intron | ||
| ENSMUST00000135991 |
Spg7-006 | 123091676-123097753 | protein_coding | ||
| ENSMUST00000142150 |
Spg7-010 | 123080409-123088988 | retained_intron | ||
| ENSMUST00000142541 |
Spg7-004 | 123062942-123079987 | protein_coding | ||
| ENSMUST00000149248 |
Spg7-001 | 123065179-123097760 | protein_coding | ||
| ENSMUST00000152972 |
Spg7-008 | 123087408-123091716 | processed_transcript | ||
| ENSMUST00000153285 |
Spg7-011 | 123065476-123097753 | protein_coding | ||
| ENSMUST00000153492 |
Spg7-007 | 123073794-123088962 | nonsense_mediated_decay | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008HA | CIL_0008HA_0002 | VISTA | 8:122617544-123223043 |
| CIL_000332 | CIL_000332_0002 | CGP | 8:122883337-123097760 |
| CIL_000331 | CIL_000331_0002 | CGP | 8:123062942-123105244 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004222 | IEA | metalloendopeptidase activity |
| GO:0005515 | IEA | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005739 | IDA | mitochondrion |
| GO:0006508 | IEA | proteolysis |
| GO:0007005 | IMP | mitochondrion organization |
| GO:0007155 | TAS | cell adhesion |
| GO:0008089 | IMP | anterograde axon cargo transport |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030155 | TAS | regulation of cell adhesion |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000068187
|
spg7 | spastic paraplegia 7 | protein_coding | Danio_rerio | |
|
ENSG00000197912
|
SPG7 | spastic paraplegia 7 (pure and complicated autosomal recessive) | protein_coding | Homo_sapiens | |
