C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) III (DNA directed) polypeptide D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000776 Polr3d 10090 - 14:70438748-70443471 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000793 Polr3d-201 70438748-70443471 protein_coding
  ENSMUST00000180358 Polr3d-202 70438748-70443227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000793ENSMUST00000180358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000793 4.643±1.67 5.608±0.97 5.365±0.03 7.919±1.72 4.591±1.63 5.445±2.08 3.284±0.33 3.273±0.86 5.272±3.31 4.452±0.82 5.979±0.97 9.455±2.79 10.710±8.08 3.545±0.53
ENSMUST00000180358 2.758±0.74 2.016±0.56 2.099±0.02 2.855±0.88 1.330±0.33 1.419±0.49 1.737±0.67 1.209±0.53 1.541±0.68 1.214±0.32 1.119±0.12 4.677±4.05 11.292±7.21 1.866±1.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IC nucleus
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0006383 IEA transcription from RNA polymerase III promoter
GO:0032728 ISS positive regulation of interferon-beta production
GO:0045087 IEA innate immune response
GO:0045089 ISS positive regulation of innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017820 polr3d polymerase (RNA) III (DNA directed) polypeptide D protein_coding Danio_rerio
ENSG00000168495 POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa protein_coding Homo_sapiens

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