C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor protein D52-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000827 Tpd52l2 10090 + 2:181497142-181517966 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000844 Tpd52l2-002 181497181-181517371 protein_coding
  ENSMUST00000069712 Tpd52l2-004 181497199-181516256 protein_coding
  ENSMUST00000108799 Tpd52l2-009 181497231-181515387 protein_coding
  ENSMUST00000108800 Tpd52l2-003 181497187-181517962 protein_coding
  ENSMUST00000129390 Tpd52l2-008 181497229-181502554 retained_intron
  ENSMUST00000130261 Tpd52l2-012 181512578-181515333 retained_intron
  ENSMUST00000141825 Tpd52l2-010 181499845-181513056 protein_coding
  ENSMUST00000149163 Tpd52l2-001 181497165-181517966 protein_coding
  ENSMUST00000155589 Tpd52l2-011 181499866-181503150 retained_intron
  ENSMUST00000183956 Tpd52l2-006 181497164-181508268 processed_transcript
  ENSMUST00000184588 Tpd52l2-005 181497142-181515115 nonsense_mediated_decay
  ENSMUST00000184849 Tpd52l2-007 181497183-181515126 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000844ENSMUST00000069712ENSMUST00000108799ENSMUST00000108800ENSMUST00000141825ENSMUST00000183956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000844 13.277±2.95 8.655±2.60 14.409±0.74 3.306±0.93 7.842±0.91 5.943±1.76 3.384±0.81 7.566±0.93 6.929±3.42 9.773±1.01 2.322±0.53 11.749±2.94 5.672±2.40 1.461±0.31
ENSMUST00000069712 9.858±0.92 N/A 8.147±0.49 9.698±5.51 4.360±0.49 4.822±0.87 5.910±1.37 3.570±0.21 5.658±2.75 5.289±0.87 4.311±0.74 7.139±1.09 10.339±2.38 3.309±0.32
ENSMUST00000108799 22.973±2.74 14.713±2.01 16.174±0.73 17.786±4.90 14.307±5.82 5.229±0.00 17.864±0.85 8.266±1.28 7.423±2.57 N/A 19.432±1.81 16.055±7.34 24.394±10.16 2.717±0.00
ENSMUST00000108800 N/A 2.834±0.00 N/A 2.076±0.15 3.086±0.27 2.387±0.55 1.868±0.03 2.218±0.30 1.438±0.20 2.623±0.11 1.312±0.25 4.785±1.08 2.669±0.56 0.957±0.28
ENSMUST00000141825 N/A N/A N/A 27.944±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 31.580±0.00 13.643±0.00
ENSMUST00000183956 29.474±0.87 28.273±8.65 34.674±0.00 31.240±0.00 23.502±3.48 27.066±4.28 N/A 11.050±0.89 16.421±7.08 21.305±7.62 N/A 63.863±22.12 64.955±31.64 10.814±9.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F0 CIL_0004F0_0002 CGP 2:181493206-181517966
CIL_0004EZ CIL_0004EZ_0002 CGP 2:181497142-181555133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0008150 ND biological_process
GO:0042803 IEA protein homodimerization activity
GO:0044822 IEA poly(A) RNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013655 tpd52l2b tumor protein D52-like 2b protein_coding Danio_rerio
ENSG00000101150 TPD52L2 tumor protein D52-like 2 protein_coding Homo_sapiens

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