C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: huntingtin interacting protein 1 related
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000915 Hip1r 10090 + 5:123973628-124003211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000939 Hip1r-001 123973628-124003211 protein_coding
  ENSMUST00000166258 Hip1r-003 123994805-123997399 nonsense_mediated_decay
  ENSMUST00000166684 Hip1r-006 124000599-124001674 retained_intron
  ENSMUST00000167325 Hip1r-005 124000383-124001688 retained_intron
  ENSMUST00000167879 Hip1r-002 123980254-123989984 protein_coding
  ENSMUST00000171407 Hip1r-004 123999410-124001007 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000939 4.697±0.40 4.067±0.91 28.272±1.47 14.866±8.31 12.541±6.30 15.444±0.96 3.384±0.42 10.764±0.39 7.612±2.32 16.552±0.62 2.728±0.68 12.724±2.24 17.451±4.51 6.998±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0001EI CIL_0001EI_0002 CGP 5:123927418-124003211
CIL_0002PB CIL_0002PB_0002 CGP 5:123973628-124032260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005543 IEA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0005905 IDA coated pit
GO:0006898 ISS receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0030136 ISS clathrin-coated vesicle
GO:0035091 ISS phosphatidylinositol binding
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059484 hip1rb huntingtin interacting protein 1 related b protein_coding Danio_rerio
ENSDARG00000060627 HIP1R (2 of 2) huntingtin interacting protein 1 related protein_coding Danio_rerio
ENSG00000130787 HIP1R huntingtin interacting protein 1 related protein_coding Homo_sapiens

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