C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanocyte proliferating gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001285 Myg1 10090 + 15:102331709-102338139 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001331 Myg1-003 102331750-102337834 protein_coding
  ENSMUST00000113682 Myg1-001 102331709-102338139 protein_coding
  ENSMUST00000164019 Myg1-006 102332430-102336877 processed_transcript
  ENSMUST00000164961 Myg1-009 102336771-102337851 retained_intron
  ENSMUST00000168547 Myg1-008 102337033-102337790 retained_intron
  ENSMUST00000170078 Myg1-002 102331738-102337851 retained_intron
  ENSMUST00000170281 Myg1-004 102331720-102332596 retained_intron
  ENSMUST00000170713 Myg1-007 102333640-102336901 retained_intron
  ENSMUST00000171244 Myg1-010 102331755-102337746 protein_coding
  ENSMUST00000171733 Myg1-005 102331917-102337195 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000001331ENSMUST00000113682ENSMUST00000170281ENSMUST00000171244ENSMUST00000171733
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000001331 N/A 17.003±3.89 N/A 10.131±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113682 14.813±3.34 15.558±4.33 24.710±0.00 12.029±1.79 12.521±1.88 7.242±0.00 23.255±2.35 11.860±6.26 14.715±2.69 18.831±4.50 17.105±0.08
ENSMUST00000170281 N/A 13.125±0.70 N/A 15.206±1.89 13.636±1.89 N/A N/A N/A 17.727±0.00 N/A N/A
ENSMUST00000171244 N/A 17.318±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171733 N/A N/A 54.550±0.00 N/A N/A N/A N/A N/A N/A 81.777±0.00 80.545±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IH CIL_0001IH_0002 CGP 15:102296293-102331873
CIL_00060P CIL_00060P_0002 CGP 15:102326116-102338139
CIL_00060Q CIL_00060Q_0002 CGP 15:102331709-102350759

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0035641 IMP locomotory exploration behavior
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069977 C11H12orf10 chromosome 12 open reading frame 10 protein_coding Danio_rerio
ENSG00000139637 C12orf10 chromosome 12 open reading frame 10 protein_coding Homo_sapiens

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